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PGSC0003DMT400052492 PGSC0003DMT400052492 PGSC0003DMT400075241 PGSC0003DMT400075241 PGSC0003DMT400075492 PGSC0003DMT400075492 PGSC0003DMT400080722 PGSC0003DMT400080722 PGSC0003DMT400052559 PGSC0003DMT400052559 PGSC0003DMT400064921 PGSC0003DMT400064921 PGSC0003DMT400046202 PGSC0003DMT400046202 BPE1 BPE1 PGSC0003DMT400052558 PGSC0003DMT400052558 PGSC0003DMT400052495 PGSC0003DMT400052495 PGSC0003DMT400052493 PGSC0003DMT400052493
"BPE1" - Pectinesterase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPE1Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (486 aa)    
Predicted Functional Partners:
PGSC0003DMT400080722
Polygalacturonase (460 aa)
       
  0.955
PGSC0003DMT400075492
Polygalacturonase (368 aa)
       
  0.955
PGSC0003DMT400075241
Polygalacturonase 5 (387 aa)
       
  0.955
PGSC0003DMT400064921
Polygalacturonase (396 aa)
       
  0.955
PGSC0003DMT400052559
Polygalacturonase 7 (379 aa)
       
  0.955
PGSC0003DMT400052558
Polygalacturonase 1 (391 aa)
       
  0.955
PGSC0003DMT400052495
Polygalacturonase (394 aa)
       
  0.955
PGSC0003DMT400052493
Polygalacturonase (389 aa)
       
  0.955
PGSC0003DMT400052492
Polygalacturonase 7 (396 aa)
       
  0.955
PGSC0003DMT400046202
NTS1 protein (409 aa)
       
  0.955
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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