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PGSC0003DMT400067274 PGSC0003DMT400067274 PGSC0003DMT400057519 PGSC0003DMT400057519 PGSC0003DMT400064404 PGSC0003DMT400064404 PGSC0003DMT400034206 PGSC0003DMT400034206 PGSC0003DMT400064403 PGSC0003DMT400064403 PGSC0003DMT400005365 PGSC0003DMT400005365 PGSC0003DMT400056705 PGSC0003DMT400056705 PGSC0003DMT400064349 PGSC0003DMT400064349 PGSC0003DMT400032324 PGSC0003DMT400032324 PGSC0003DMT400049542 PGSC0003DMT400049542 PGSC0003DMT400048609 PGSC0003DMT400048609
"PGSC0003DMT400005365" - Leng8 protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400005365Leng8 protein (417 aa)    
Predicted Functional Partners:
PGSC0003DMT400056705
PCI domain-containing protein (178 aa)
       
 
  0.970
PGSC0003DMT400034206
PCI domain-containing protein (415 aa)
       
 
  0.970
PGSC0003DMT400032324
Glutamyl-tRNA(Gln) amidotransferase subunit C (140 aa)
     
 
  0.963
PGSC0003DMT400067274
Ccd1 (119 aa)
     
 
  0.941
PGSC0003DMT400064404
Avr9/Cf-9 rapidly elicited protein 20 (122 aa)
     
 
  0.941
PGSC0003DMT400064403
Avr9/Cf-9 rapidly elicited protein 20 (117 aa)
     
 
  0.941
PGSC0003DMT400064349
Ccd1 (118 aa)
     
 
  0.941
PGSC0003DMT400057519
Ccd1 (115 aa)
     
 
  0.941
PGSC0003DMT400049542
Conserved gene of unknown function (113 aa)
     
 
  0.941
PGSC0003DMT400048609
Ccd1 (122 aa)
     
 
  0.941
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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