Full Link:
STRINGSTRING
PGSC0003DMT400071659 PGSC0003DMT400071659 PGSC0003DMT400005492 PGSC0003DMT400005492 PGSC0003DMT400053837 PGSC0003DMT400053837 PGSC0003DMT400063336 PGSC0003DMT400063336 PGSC0003DMT400048854 PGSC0003DMT400048854 PGSC0003DMT400001528 PGSC0003DMT400001528 ndhK ndhK PGSC0003DMT400049468 PGSC0003DMT400049468 PGSC0003DMT400003262 PGSC0003DMT400003262 ndhJ ndhJ ndhC ndhC
"PGSC0003DMT400005492" - PTAC16 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400005492PTAC16 (495 aa)    
Predicted Functional Partners:
ndhK
NAD(P)H-quinone oxidoreductase subunit K, chloroplastic; NDH shuttles electrons from NAD(P)H-plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (212 aa)
   
  0.949
PGSC0003DMT400001528
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (158 aa)
     
    0.941
ndhC
NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic; NDH shuttles electrons from NAD(P)H-plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (70 aa)
     
  0.889
PGSC0003DMT400003262
NADH dehydrogenase (487 aa)
     
  0.863
PGSC0003DMT400053837
Gene of unknown function (72 aa)
   
  0.852
PGSC0003DMT400049468
NAD(P)H-quinone oxidoreductase subunit J, chloroplastic (95 aa)
   
  0.852
PGSC0003DMT400048854
NADH-ubiquinone oxidoreductase (119 aa)
   
  0.852
ndhJ
NAD(P)H-quinone oxidoreductase subunit J, chloroplastic; NDH shuttles electrons from NAD(P)H-plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (105 aa)
   
  0.852
PGSC0003DMT400071659
ATP synthase gamma chain (362 aa)
   
        0.836
PGSC0003DMT400063336
ATP synthase subunit gamma, mitochondrial (324 aa)
   
        0.836
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (2%)