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PGSC0003DMT400055484 PGSC0003DMT400055484 PGSC0003DMT400064287 PGSC0003DMT400064287 PGSC0003DMT400059923 PGSC0003DMT400059923 St123 St123 PGSC0003DMT400005506 PGSC0003DMT400005506 PGSC0003DMT400017673 PGSC0003DMT400017673 PGSC0003DMT400055473 PGSC0003DMT400055473 PGSC0003DMT400038744 PGSC0003DMT400038744 PGSC0003DMT400045216 PGSC0003DMT400045216 PGSC0003DMT400078996 PGSC0003DMT400078996 PGSC0003DMT400023921 PGSC0003DMT400023921
"PGSC0003DMT400005506" - Zinc transporter in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400005506Zinc transporter (334 aa)    
Predicted Functional Partners:
PGSC0003DMT400017673
Metal ion transporter (595 aa)
     
 
  0.770
PGSC0003DMT400038744
Metal tolerance protein C2 (260 aa)
     
   
  0.490
St123
Cation efflux family protein (893 aa)
     
   
  0.490
PGSC0003DMT400064287
Metal transporter (515 aa)
           
  0.461
PGSC0003DMT400059923
NRAMP2 (518 aa)
           
  0.461
PGSC0003DMT400055484
Ethylene signaling protein (1301 aa)
           
  0.461
PGSC0003DMT400055473
NRAMP2 (540 aa)
           
  0.461
PGSC0003DMT400023921
Root-specific metal transporter (530 aa)
           
  0.461
PGSC0003DMT400045216
Cinnamoyl-CoA reductase (561 aa)
     
 
  0.451
PGSC0003DMT400078996
Metal tolerance protein (353 aa)
     
   
  0.423
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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