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PGSC0003DMT400073947 PGSC0003DMT400073947 PGSC0003DMT400076743 PGSC0003DMT400076743 PGSC0003DMT400041777 PGSC0003DMT400041777 PGSC0003DMT400005689 PGSC0003DMT400005689 PGSC0003DMT400010037 PGSC0003DMT400010037 PGSC0003DMT400031618 PGSC0003DMT400031618 PGSC0003DMT400007282 PGSC0003DMT400007282 PGSC0003DMT400059968 PGSC0003DMT400059968 PGSC0003DMT400056899 PGSC0003DMT400056899 PGSC0003DMT400013148 PGSC0003DMT400013148 PGSC0003DMT400041585 PGSC0003DMT400041585
"PGSC0003DMT400005689" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400005689Conserved gene of unknown function (326 aa)    
Predicted Functional Partners:
PGSC0003DMT400031618
Carbon-nitrogen hydrolase family protein (731 aa)
     
      0.727
PGSC0003DMT400010037
Immature colon carcinoma transcript (269 aa)
   
   
  0.635
PGSC0003DMT400059968
Phenylalanyl-tRNA synthetase (434 aa)
   
        0.627
PGSC0003DMT400073947
PRP8 protein (2389 aa)
       
      0.524
PGSC0003DMT400013148
Aspartyl-tRNA synthetase (383 aa)
   
   
  0.511
PGSC0003DMT400076743
Peptide chain release factor (431 aa)
   
   
  0.447
PGSC0003DMT400007282
Peptide chain release factor (478 aa)
   
   
  0.447
PGSC0003DMT400056899
Iojap protein (233 aa)
   
   
  0.432
PGSC0003DMT400041585
TRNA/rRNA methyltransferase family protein (207 aa)
     
   
  0.413
PGSC0003DMT400041777
Conserved gene of unknown function (211 aa)
         
  0.409
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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