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PGSC0003DMT400017726 PGSC0003DMT400017726 PGSC0003DMT400077607 PGSC0003DMT400077607 PGSC0003DMT400073947 PGSC0003DMT400073947 PGSC0003DMT400075431 PGSC0003DMT400075431 PGSC0003DMT400029953 PGSC0003DMT400029953 PGSC0003DMT400057595 PGSC0003DMT400057595 PGSC0003DMT400044280 PGSC0003DMT400044280 PGSC0003DMT400009873 PGSC0003DMT400009873 PGSC0003DMT400005723 PGSC0003DMT400005723 PGSC0003DMT400023040 PGSC0003DMT400023040 PGSC0003DMT400020416 PGSC0003DMT400020416
"PGSC0003DMT400005723" - EMB2733/ESP3 (EMBRYO DEFECTIVE 2733) in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400005723EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase (822 aa)    
Predicted Functional Partners:
PGSC0003DMT400073947
PRP8 protein (2389 aa)
     
  0.982
PGSC0003DMT400057595
Conserved gene of unknown function (580 aa)
     
  0.981
PGSC0003DMT400075431
Pre-mRNA-splicing factor (451 aa)
     
  0.970
PGSC0003DMT400044280
Pre-mRNA-splicing factor (521 aa)
     
  0.970
PGSC0003DMT400029953
CDC5 (986 aa)
     
  0.968
PGSC0003DMT400077607
Spliceosomal protein sap (1211 aa)
     
  0.968
PGSC0003DMT400017726
XPA-binding protein (915 aa)
     
  0.963
PGSC0003DMT400023040
PP1/PP2A phosphatases pleiotropic regulator PRL1 (307 aa)
     
  0.961
PGSC0003DMT400020416
PHD finger-like domain-containing protein 5A (110 aa)
       
  0.960
PGSC0003DMT400009873
Splicing factor 3A subunit (339 aa)
       
  0.957
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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