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PGSC0003DMT400068109 PGSC0003DMT400068109 PGSC0003DMT400079883 PGSC0003DMT400079883 PGSC0003DMT400031814 PGSC0003DMT400031814 PGSC0003DMT400073985 PGSC0003DMT400073985 PGSC0003DMT400079233 PGSC0003DMT400079233 PGSC0003DMT400069554 PGSC0003DMT400069554 PGSC0003DMT400005728 PGSC0003DMT400005728 PGSC0003DMT400056692 PGSC0003DMT400056692 PGSC0003DMT400023432 PGSC0003DMT400023432 PGSC0003DMT400055506 PGSC0003DMT400055506 PGSC0003DMT400065483 PGSC0003DMT400065483
"PGSC0003DMT400005728" - Queuine tRNA-ribosyltransferase in Solanum tuberosum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
PGSC0003DMT400005728Queuine tRNA-ribosyltransferase (177 aa)    
Predicted Functional Partners:
PGSC0003DMT400079233
Queuine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) (410 aa)
   
0.974
PGSC0003DMT400056692
ATP-dependent RNA helicase (1141 aa)
   
   
  0.641
PGSC0003DMT400073985
Methionyl-tRNA synthetase (812 aa)
   
   
  0.620
PGSC0003DMT400031814
GMP synthase (536 aa)
   
   
  0.588
PGSC0003DMT400079883
SIGB (SIGMA FACTOR B) (613 aa)
     
 
  0.506
PGSC0003DMT400069554
Sigma factor (505 aa)
     
 
  0.506
PGSC0003DMT400068109
Sigma factor (610 aa)
     
 
  0.506
PGSC0003DMT400065483
RNA polymerase sigma factor rpoD (555 aa)
     
 
  0.506
PGSC0003DMT400055506
RNA polymerase sigma factor rpoD (582 aa)
     
 
  0.506
PGSC0003DMT400023432
RNA polymerase sigma factor rpoD (516 aa)
     
 
  0.506
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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