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PGSC0003DMT400083089 PGSC0003DMT400083089 PGSC0003DMT400079665 PGSC0003DMT400079665 PGSC0003DMT400078706 PGSC0003DMT400078706 PGSC0003DMT400083940 PGSC0003DMT400083940 PGSC0003DMT400078229 PGSC0003DMT400078229 PGSC0003DMT400006126 PGSC0003DMT400006126 PGSC0003DMT400046818 PGSC0003DMT400046818 PGSC0003DMT400076252 PGSC0003DMT400076252 PGSC0003DMT400051791 PGSC0003DMT400051791 PGSC0003DMT400069419 PGSC0003DMT400069419 PGSC0003DMT400068240 PGSC0003DMT400068240
"PGSC0003DMT400006126" - C2H2-type zinc finger protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400006126C2H2-type zinc finger protein (288 aa)    
Predicted Functional Partners:
PGSC0003DMT400051791
Transcriptional activator (344 aa)
       
  0.767
PGSC0003DMT400078229
Receptor protein kinase (1232 aa)
     
  0.744
PGSC0003DMT400076252
Histone deacetylase (536 aa)
       
  0.729
PGSC0003DMT400069419
HDA6 (HISTONE DEACETYLASE 6); histone deacetylase (471 aa)
       
  0.729
PGSC0003DMT400068240
Histone deacetylase (397 aa)
       
  0.729
PGSC0003DMT400046818
Histone deacetylase (456 aa)
       
  0.729
PGSC0003DMT400083940
Serine-threonine protein kinase, plant-type (862 aa)
     
  0.724
PGSC0003DMT400083089
Brassinosteroid LRR receptor kinase (1106 aa)
     
  0.724
PGSC0003DMT400079665
Transmembrane protein kinase (748 aa)
     
  0.724
PGSC0003DMT400078706
Receptor protein kinase CLAVATA1 (1017 aa)
     
  0.724
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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