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PGSC0003DMT400018853 PGSC0003DMT400018853 PGSC0003DMT400038671 PGSC0003DMT400038671 PGSC0003DMT400042256 PGSC0003DMT400042256 SXD1 SXD1 PGSC0003DMT400067881 PGSC0003DMT400067881 TMT TMT PGSC0003DMT400067880 PGSC0003DMT400067880 PGSC0003DMT400012718 PGSC0003DMT400012718 PGSC0003DMT400026995 PGSC0003DMT400026995 PGSC0003DMT400038174 PGSC0003DMT400038174 PGSC0003DMT400025700 PGSC0003DMT400025700
"TMT" - Gamma-tocopherol methyltransferase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMTGamma-tocopherol methyltransferase (310 aa)    
Predicted Functional Partners:
SXD1
Tocopherol cyclase (501 aa)
 
 
  0.973
PGSC0003DMT400042256
Obtusifoliol 14alpha-demethylase (487 aa)
     
 
  0.845
PGSC0003DMT400012718
Erg28 (129 aa)
       
 
  0.803
PGSC0003DMT400067881
Delta(7)-sterol-C5(6)-desaturase (271 aa)
     
 
  0.796
PGSC0003DMT400067880
Delta(7)-sterol-C5(6)-desaturase (270 aa)
     
 
  0.796
PGSC0003DMT400026995
Sterol-C5(6)-desaturase homolog (271 aa)
     
 
  0.796
PGSC0003DMT400038671
3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3 (96 aa)
     
 
  0.767
PGSC0003DMT400025700
Hydroxysteroid dehydrogenase (478 aa)
     
 
  0.767
PGSC0003DMT400018853
3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 (420 aa)
     
 
  0.767
PGSC0003DMT400038174
Sterol delta-7 reductase DWF5 (434 aa)
     
 
  0.765
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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