Full Link:
STRINGSTRING
PGSC0003DMT400064667 PGSC0003DMT400064667 PGSC0003DMT400066342 PGSC0003DMT400066342 PGSC0003DMT400071012 PGSC0003DMT400071012 PGSC0003DMT400063292 PGSC0003DMT400063292 PGSC0003DMT400025952 PGSC0003DMT400025952 PGSC0003DMT400022054 PGSC0003DMT400022054 PGSC0003DMT400060224 PGSC0003DMT400060224 PGSC0003DMT400006218 PGSC0003DMT400006218 PGSC0003DMT400002020 PGSC0003DMT400002020 PGSC0003DMT400041628 PGSC0003DMT400041628 PGSC0003DMT400046728 PGSC0003DMT400046728
"PGSC0003DMT400006218" - GNS1/SUR4 membrane protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400006218GNS1/SUR4 membrane protein (273 aa)    
Predicted Functional Partners:
PGSC0003DMT400041628
Phosphatidylinositol glycan (968 aa)
       
      0.527
PGSC0003DMT400060224
TSC13 protein (310 aa)
     
 
  0.523
PGSC0003DMT400071012
Serine palmitoyltransferase I (486 aa)
       
 
  0.496
PGSC0003DMT400025952
Short-chain dehydrogenase (262 aa)
     
 
  0.493
PGSC0003DMT400002020
Short-chain dehydrogenase (263 aa)
     
 
  0.493
PGSC0003DMT400022054
Homomeric Acetyl-CoA Carboxylase (Hom-ACCase) (2267 aa)
     
 
  0.483
PGSC0003DMT400046728
Vacuolar protein sorting (189 aa)
       
      0.482
PGSC0003DMT400066342
Longevity assurance factor (288 aa)
     
 
  0.416
PGSC0003DMT400064667
ASC1 (305 aa)
     
 
  0.416
PGSC0003DMT400063292
Protein ASC1 (305 aa)
     
 
  0.416
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (2%)