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PGSC0003DMT400078769 PGSC0003DMT400078769 PGSC0003DMT400040293 PGSC0003DMT400040293 PGSC0003DMT400078771 PGSC0003DMT400078771 PGSC0003DMT400006383 PGSC0003DMT400006383 PGSC0003DMT400076451 PGSC0003DMT400076451 PGSC0003DMT400078229 PGSC0003DMT400078229 PGSC0003DMT400017488 PGSC0003DMT400017488 PGSC0003DMT400076806 PGSC0003DMT400076806 CDF1.2 CDF1.2 PGSC0003DMT400061742 PGSC0003DMT400061742 PGSC0003DMT400073985 PGSC0003DMT400073985
"PGSC0003DMT400006383" - Metallo-beta-lactamase family protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400006383Metallo-beta-lactamase family protein (351 aa)    
Predicted Functional Partners:
PGSC0003DMT400040293
DNA pol lambda (184 aa)
       
      0.867
PGSC0003DMT400073985
Methionyl-tRNA synthetase (812 aa)
              0.529
PGSC0003DMT400078229
Receptor protein kinase (1232 aa)
   
   
  0.461
CDF1.2
Zinc finger protein (442 aa)
         
  0.427
PGSC0003DMT400017488
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1487 aa)
         
  0.417
PGSC0003DMT400078771
Protease Do-like 7 (168 aa)
         
  0.401
PGSC0003DMT400078769
DegP protease (213 aa)
         
  0.401
PGSC0003DMT400076806
Protease degS (302 aa)
         
  0.401
PGSC0003DMT400076451
Protease/hydrolase (767 aa)
         
  0.401
PGSC0003DMT400061742
Serine endopeptidase degp2 (505 aa)
         
  0.401
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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