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PGSC0003DMT400068726 PGSC0003DMT400068726 PGSC0003DMT400068720 PGSC0003DMT400068720 PGSC0003DMT400025851 PGSC0003DMT400025851 PGSC0003DMT400068727 PGSC0003DMT400068727 PGSC0003DMT400024783 PGSC0003DMT400024783 PGSC0003DMT400080548 PGSC0003DMT400080548 PGSC0003DMT400006584 PGSC0003DMT400006584 PGSC0003DMT400060308 PGSC0003DMT400060308 PAL-1 PAL-1 PGSC0003DMT400055488 PGSC0003DMT400055488
"PGSC0003DMT400006584" - F-box/kelch-repeat protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400006584F-box/kelch-repeat protein (355 aa)    
Predicted Functional Partners:
PGSC0003DMT400080548
Phenylalanine ammonia-lyase (711 aa)
       
      0.597
PGSC0003DMT400060308
Phenylalanine ammonia-lyase (707 aa)
       
      0.597
PAL-1
Phenylalanine ammonia-lyase; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton (719 aa)
       
      0.597
PGSC0003DMT400055488
Phenylalanine ammonia-lyase (722 aa)
       
      0.597
PGSC0003DMT400025851
BTB/POZ domain-containing protein (803 aa)
     
 
  0.431
PGSC0003DMT400068727
SKP1 (150 aa)
       
    0.425
PGSC0003DMT400068726
SKP1 3 (150 aa)
       
    0.425
PGSC0003DMT400068720
SKP1 3 (149 aa)
       
    0.425
PGSC0003DMT400024783
SKP1 (150 aa)
       
    0.425
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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