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PGSC0003DMT400055262 PGSC0003DMT400055262 PGSC0003DMT400072522 PGSC0003DMT400072522 PGSC0003DMT400060190 PGSC0003DMT400060190 PGSC0003DMT400006627 PGSC0003DMT400006627 PGSC0003DMT400025104 PGSC0003DMT400025104 PGSC0003DMT400024409 PGSC0003DMT400024409 hma1 hma1 PGSC0003DMT400078229 PGSC0003DMT400078229 PGSC0003DMT400032707 PGSC0003DMT400032707 PGSC0003DMT400032161 PGSC0003DMT400032161 PGSC0003DMT400032160 PGSC0003DMT400032160
"PGSC0003DMT400006627" - Phospholipid-transporting ATPase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400006627Phospholipid-transporting ATPase (1210 aa)    
Predicted Functional Partners:
hma1
Heavy metal cation transport atpase (817 aa)
   
  0.763
PGSC0003DMT400032707
Copper-transporting atpase paa1 (234 aa)
   
  0.763
PGSC0003DMT400032161
Heavy metal ATPase (132 aa)
   
  0.763
PGSC0003DMT400032160
Copper-transporting atpase p-type (397 aa)
   
  0.763
PGSC0003DMT400024409
Heavy metal ATPase (1002 aa)
   
  0.763
PGSC0003DMT400060190
LEM3 (Ligand-effect modulator 3) family protein (596 aa)
     
 
  0.699
PGSC0003DMT400055262
ALA-interacting subunit 5 (344 aa)
     
 
  0.699
PGSC0003DMT400072522
Vacuolar ATP synthase subunit ac39 (351 aa)
     
 
  0.594
PGSC0003DMT400025104
Ferredoxin-dependent glutamate synthase 1 (1621 aa)
   
   
  0.587
PGSC0003DMT400078229
Receptor protein kinase (1232 aa)
   
 
  0.567
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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