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PGSC0003DMT400017981 PGSC0003DMT400017981 PGSC0003DMT400006735 PGSC0003DMT400006735 YABBY1 YABBY1 PGSC0003DMT400066793 PGSC0003DMT400066793 PGSC0003DMT400034663 PGSC0003DMT400034663
"PGSC0003DMT400006735" - DNA binding protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400006735DNA binding protein (835 aa)    
Predicted Functional Partners:
PGSC0003DMT400034663
KANADI like transcription factor (450 aa)
           
  0.418
PGSC0003DMT400017981
KANADI like transcription factor (377 aa)
           
  0.418
PGSC0003DMT400066793
YABBY1 (218 aa)
           
  0.405
YABBY1
Axial regulator YABBY1 (219 aa)
           
  0.405
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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