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PGSC0003DMT400019238 PGSC0003DMT400019238 PGSC0003DMT400055259 PGSC0003DMT400055259 PGSC0003DMT400050774 PGSC0003DMT400050774 PGSC0003DMT400006957 PGSC0003DMT400006957 PGSC0003DMT400011736 PGSC0003DMT400011736 PGSC0003DMT400050223 PGSC0003DMT400050223
"PGSC0003DMT400006957" - Stress-associated protein 8 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400006957Stress-associated protein 8 (150 aa)    
Predicted Functional Partners:
PGSC0003DMT400011736
Ubiquitin extension protein (181 aa)
       
    0.889
PGSC0003DMT400055259
Guanine nucleotide regulatory protein (200 aa)
       
 
  0.682
PGSC0003DMT400050774
GTP binding protein (200 aa)
       
 
  0.682
PGSC0003DMT400019238
RAB5B (200 aa)
       
 
  0.682
PGSC0003DMT400050223
Sand family protein (395 aa)
       
 
  0.438
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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