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PGSC0003DMT400008389 PGSC0003DMT400008389 PGSC0003DMT400073985 PGSC0003DMT400073985 PGSC0003DMT400070106 PGSC0003DMT400070106 PGSC0003DMT400060907 PGSC0003DMT400060907 PGSC0003DMT400017488 PGSC0003DMT400017488 PGSC0003DMT400029301 PGSC0003DMT400029301 PGSC0003DMT400007038 PGSC0003DMT400007038 PGSC0003DMT400033135 PGSC0003DMT400033135 PGSC0003DMT400033137 PGSC0003DMT400033137 PGSC0003DMT400035809 PGSC0003DMT400035809 PGSC0003DMT400018210 PGSC0003DMT400018210
"PGSC0003DMT400007038" - Repressor of silencing 1 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
PGSC0003DMT400007038Repressor of silencing 1 (1834 aa)    
Predicted Functional Partners:
PGSC0003DMT400018210
Polynucleotide kinase-3’-phosphatase (365 aa)
       
 
  0.930
PGSC0003DMT400033137
Apurinic endonuclease-redox protein (301 aa)
     
  0.813
PGSC0003DMT400033135
Apurinic endonuclease-redox protein (122 aa)
     
  0.813
PGSC0003DMT400073985
Methionyl-tRNA synthetase (812 aa)
   
   
  0.804
PGSC0003DMT400029301
Endoribonuclease Dicer homolog (1914 aa)
   
 
  0.742
PGSC0003DMT400017488
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1487 aa)
   
 
  0.690
PGSC0003DMT400070106
Thioredoxin reductase (231 aa)
         
  0.650
PGSC0003DMT400060907
Thioredoxin reductase (543 aa)
         
  0.650
PGSC0003DMT400035809
Replication factor A (272 aa)
     
 
  0.606
PGSC0003DMT400008389
Malic enzyme (265 aa)
         
  0.583
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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