Full Link:
STRINGSTRING
PGSC0003DMT400034028 PGSC0003DMT400034028 PGSC0003DMT400074894 PGSC0003DMT400074894 PGSC0003DMT400067463 PGSC0003DMT400067463 PGSC0003DMT400007119 PGSC0003DMT400007119 PGSC0003DMT400073369 PGSC0003DMT400073369 PGSC0003DMT400053840 PGSC0003DMT400053840 PGSC0003DMT400073367 PGSC0003DMT400073367 PGSC0003DMT400070836 PGSC0003DMT400070836 PGSC0003DMT400038831 PGSC0003DMT400038831 PGSC0003DMT400013824 PGSC0003DMT400013824 PGSC0003DMT400041326 PGSC0003DMT400041326
"PGSC0003DMT400007119" - Synbindin in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400007119Synbindin (141 aa)    
Predicted Functional Partners:
PGSC0003DMT400038831
SPP30 (194 aa)
     
  0.989
PGSC0003DMT400013824
Trafficking protein particle complex subunit (186 aa)
     
  0.988
PGSC0003DMT400070836
Trafficking protein particle complex subunit 6b (175 aa)
     
  0.988
PGSC0003DMT400074894
Trafficking protein particle complex subunit (147 aa)
     
  0.987
PGSC0003DMT400053840
Conserved gene of unknown function (169 aa)
     
0.986
PGSC0003DMT400073369
TRAPP subunit (135 aa)
     
  0.976
PGSC0003DMT400073367
TRAPP subunit (133 aa)
     
  0.976
PGSC0003DMT400067463
Small GTP-binding protein (203 aa)
     
  0.880
PGSC0003DMT400041326
Small GTP-binding protein (203 aa)
     
  0.880
PGSC0003DMT400034028
GTP-binding protein (203 aa)
     
  0.880
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (2%)