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PGSC0003DMT400073985 PGSC0003DMT400073985 PGSC0003DMT400076034 PGSC0003DMT400076034 PGSC0003DMT400008389 PGSC0003DMT400008389 PGSC0003DMT400017488 PGSC0003DMT400017488 PGSC0003DMT400072898 PGSC0003DMT400072898 PGSC0003DMT400062993 PGSC0003DMT400062993 PGSC0003DMT400007222 PGSC0003DMT400007222 PGSC0003DMT400022054 PGSC0003DMT400022054 PGSC0003DMT400010389 PGSC0003DMT400010389 PGSC0003DMT400066393 PGSC0003DMT400066393 PGSC0003DMT400001743 PGSC0003DMT400001743
"PGSC0003DMT400007222" - Xaa-pro dipeptidase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400007222Xaa-pro dipeptidase (300 aa)    
Predicted Functional Partners:
PGSC0003DMT400008389
Malic enzyme (265 aa)
   
   
  0.765
PGSC0003DMT400072898
Dihydropterin pyrophosphokinase-dihydropteroate synthase (509 aa)
   
   
  0.755
PGSC0003DMT400022054
Homomeric Acetyl-CoA Carboxylase (Hom-ACCase) (2267 aa)
         
  0.746
PGSC0003DMT400066393
ATPREP1 (1072 aa)
   
      0.589
PGSC0003DMT400062993
Serine/threonine protein kinase (342 aa)
       
      0.550
PGSC0003DMT400010389
Serine/threonine protein kinase (339 aa)
       
      0.550
PGSC0003DMT400001743
Serine/threonine protein kinase (335 aa)
       
      0.550
PGSC0003DMT400017488
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1487 aa)
   
   
  0.545
PGSC0003DMT400073985
Methionyl-tRNA synthetase (812 aa)
   
 
  0.535
PGSC0003DMT400076034
Conserved gene of unknown function (650 aa)
     
      0.526
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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