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PGSC0003DMT400024558 PGSC0003DMT400024558 PGSC0003DMT400074349 PGSC0003DMT400074349 PGSC0003DMT400055473 PGSC0003DMT400055473 PGSC0003DMT400064287 PGSC0003DMT400064287 PGSC0003DMT400007275 PGSC0003DMT400007275 PGSC0003DMT400000536 PGSC0003DMT400000536 PGSC0003DMT400026254 PGSC0003DMT400026254
"PGSC0003DMT400007275" - Nicotianamine synthase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400007275Nicotianamine synthase (317 aa)    
Predicted Functional Partners:
PGSC0003DMT400064287
Metal transporter (515 aa)
           
  0.508
PGSC0003DMT400055473
NRAMP2 (540 aa)
           
  0.508
PGSC0003DMT400074349
Ferric reductase (747 aa)
           
  0.403
PGSC0003DMT400026254
Ferric-chelate reductase (705 aa)
           
  0.403
PGSC0003DMT400024558
Ferric-chelate reductase (707 aa)
           
  0.403
PGSC0003DMT400000536
Ferric-chelate reductase (721 aa)
           
  0.403
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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