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PGSC0003DMT400066044 PGSC0003DMT400066044 PGSC0003DMT400075040 PGSC0003DMT400075040 PGSC0003DMT400043182 PGSC0003DMT400043182 PGSC0003DMT400075035 PGSC0003DMT400075035 PGSC0003DMT400007696 PGSC0003DMT400007696 PGSC0003DMT400010265 PGSC0003DMT400010265 PGSC0003DMT400042104 PGSC0003DMT400042104 PGSC0003DMT400022705 PGSC0003DMT400022705 PGSC0003DMT400010264 PGSC0003DMT400010264 PGSC0003DMT400060416 PGSC0003DMT400060416 PGSC0003DMT400036816 PGSC0003DMT400036816
"PGSC0003DMT400007696" - Serine/threonine-protein kinase Nek4 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400007696Serine/threonine-protein kinase Nek4 (151 aa)    
Predicted Functional Partners:
PGSC0003DMT400075035
EMB3013 (263 aa)
   
   
  0.571
PGSC0003DMT400042104
Nuclear-pore anchor (2049 aa)
     
 
  0.509
PGSC0003DMT400060416
Proteophosphoglycan ppg4 (1092 aa)
     
 
    0.448
PGSC0003DMT400036816
Nucleoporin (1033 aa)
     
 
    0.448
PGSC0003DMT400010265
Nucleoporin 98 (559 aa)
     
 
    0.448
PGSC0003DMT400010264
Transporter (180 aa)
     
 
    0.448
PGSC0003DMT400022705
Protein kinase (228 aa)
   
     
  0.421
PGSC0003DMT400075040
EMB3013 (92 aa)
     
   
  0.417
PGSC0003DMT400066044
ATP binding protein (91 aa)
     
   
  0.417
PGSC0003DMT400043182
EMB3013 (224 aa)
     
   
  0.417
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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