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PGSC0003DMT400033530 PGSC0003DMT400033530 PGSC0003DMT400084311 PGSC0003DMT400084311 PGSC0003DMT400060868 PGSC0003DMT400060868 PGSC0003DMT400082809 PGSC0003DMT400082809 PGSC0003DMT400007698 PGSC0003DMT400007698 PGSC0003DMT400072829 PGSC0003DMT400072829 PGSC0003DMT400066160 PGSC0003DMT400066160 PGSC0003DMT400025922 PGSC0003DMT400025922 PGSC0003DMT400040024 PGSC0003DMT400040024 PGSC0003DMT400047444 PGSC0003DMT400047444 PGSC0003DMT400035368 PGSC0003DMT400035368
"PGSC0003DMT400007698" - Protein kinase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400007698Protein kinase (1001 aa)    
Predicted Functional Partners:
PGSC0003DMT400035368
Serine/threonine-protein kinase Nek4 (339 aa)
       
0.654
PGSC0003DMT400060868
Kinase family protein (731 aa)
       
0.652
PGSC0003DMT400084311
ATP binding protein (651 aa)
       
0.647
PGSC0003DMT400033530
Armadillo/beta-catenin repeat family protein (708 aa)
       
 
  0.628
PGSC0003DMT400082809
ATP binding / protein kinase/ protein serine/threonine kinase (527 aa)
     
 
  0.584
PGSC0003DMT400040024
Anaphase-promoting complex; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (191 aa)
     
 
    0.571
PGSC0003DMT400047444
Anaphase promoting complex protein (884 aa)
     
 
    0.568
PGSC0003DMT400025922
Bubr1 (387 aa)
     
 
    0.565
PGSC0003DMT400072829
Initiation factor 5a (325 aa)
         
    0.564
PGSC0003DMT400066160
Mitotic checkpoint protein bub3 (340 aa)
         
    0.550
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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