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PGSC0003DMT400021055 PGSC0003DMT400021055 PGSC0003DMT400095279 PGSC0003DMT400095279 PGSC0003DMT400058126 PGSC0003DMT400058126 PGSC0003DMT400093225 PGSC0003DMT400093225 PGSC0003DMT400083734 PGSC0003DMT400083734 PGSC0003DMT400007737 PGSC0003DMT400007737 PGSC0003DMT400083474 PGSC0003DMT400083474 PGSC0003DMT400009177 PGSC0003DMT400009177 PGSC0003DMT400027809 PGSC0003DMT400027809 PGSC0003DMT400047241 PGSC0003DMT400047241 PGSC0003DMT400025581 PGSC0003DMT400025581
"PGSC0003DMT400007737" - Regulator of gene silencing in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400007737Regulator of gene silencing (193 aa)    
Predicted Functional Partners:
PGSC0003DMT400047241
Two pore calcium channel protein 1A (203 aa)
       
 
  0.912
PGSC0003DMT400058126
Calcium-dependent protein kinase (568 aa)
     
  0.831
PGSC0003DMT400009177
Calcium-dependent protein kinase CPK4 (564 aa)
     
  0.831
PGSC0003DMT400025581
Calcium-dependent protein kinase (540 aa)
     
  0.828
PGSC0003DMT400083474
Calcium-dependent protein kinase 8 (532 aa)
     
  0.824
PGSC0003DMT400027809
Calcium-dependent protein kinase 8 (533 aa)
     
  0.824
PGSC0003DMT400021055
Calcium-dependent protein kinase 4 (524 aa)
     
  0.824
PGSC0003DMT400095279
Calcium-dependent protein kinase (175 aa)
       
  0.824
PGSC0003DMT400093225
Conserved gene of unknown function (199 aa)
       
  0.824
PGSC0003DMT400083734
Calcium-dependent protein kinase (457 aa)
       
  0.824
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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