Full Link:
STRINGSTRING
PGSC0003DMT400006419 PGSC0003DMT400006419 PGSC0003DMT400080167 PGSC0003DMT400080167 PGSC0003DMT400069666 PGSC0003DMT400069666 PGSC0003DMT400079981 PGSC0003DMT400079981 PGSC0003DMT400007965 PGSC0003DMT400007965 PGSC0003DMT400006517 PGSC0003DMT400006517 PGSC0003DMT400001904 PGSC0003DMT400001904 PGSC0003DMT400037253 PGSC0003DMT400037253 PGSC0003DMT400017294 PGSC0003DMT400017294 PGSC0003DMT400067208 PGSC0003DMT400067208 PGSC0003DMT400017925 PGSC0003DMT400017925
"PGSC0003DMT400007965" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400007965Conserved gene of unknown function (445 aa)    
Predicted Functional Partners:
PGSC0003DMT400080167
RAB7A (189 aa)
     
 
  0.595
PGSC0003DMT400079981
Nt-rab7c protein (252 aa)
     
 
  0.595
PGSC0003DMT400006517
Small GTPase Rab2 (205 aa)
     
 
  0.595
PGSC0003DMT400001904
GTP-binding protein (206 aa)
     
 
  0.595
PGSC0003DMT400069666
Protein phosphatase pp2a regulatory subunit B (494 aa)
       
 
  0.538
PGSC0003DMT400017294
Ser/Thr specific protein phosphatase 2A B regulatory subunit alpha isoform (545 aa)
       
 
  0.538
PGSC0003DMT400006419
Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform (488 aa)
       
 
  0.538
PGSC0003DMT400067208
Uracil phosphoribosyltransferase (485 aa)
     
      0.525
PGSC0003DMT400037253
Uridine kinase (467 aa)
     
      0.525
PGSC0003DMT400017925
Uridine kinase (357 aa)
     
      0.525
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (7%)