Full Link:
STRINGSTRING
PGSC0003DMT400021706 PGSC0003DMT400021706 PGSC0003DMT400069671 PGSC0003DMT400069671 PGSC0003DMT400050885 PGSC0003DMT400050885 PGSC0003DMT400078454 PGSC0003DMT400078454 PGSC0003DMT400046603 PGSC0003DMT400046603 PGSC0003DMT400042247 PGSC0003DMT400042247 PGSC0003DMT400007970 PGSC0003DMT400007970 PGSC0003DMT400019729 PGSC0003DMT400019729 PGSC0003DMT400072898 PGSC0003DMT400072898 PGSC0003DMT400050490 PGSC0003DMT400050490 PGSC0003DMT400076747 PGSC0003DMT400076747
"PGSC0003DMT400007970" - Double-stranded DNA-binding protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400007970Double-stranded DNA-binding protein (128 aa)    
Predicted Functional Partners:
PGSC0003DMT400072898
Dihydropterin pyrophosphokinase-dihydropteroate synthase (509 aa)
       
      0.915
PGSC0003DMT400042247
Prefoldin subunit 5 (147 aa)
   
 
  0.663
PGSC0003DMT400050490
UMP synthase (472 aa)
       
      0.574
PGSC0003DMT400076747
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin (130 aa)
       
      0.518
PGSC0003DMT400019729
Dihydroneopterin aldolase (75 aa)
       
      0.518
PGSC0003DMT400069671
Ribosomal protein L41 (105 aa)
   
        0.445
PGSC0003DMT400050885
Ribosomal protein L41 (154 aa)
   
        0.445
PGSC0003DMT400046603
Ribosomal protein L41 (105 aa)
   
        0.445
PGSC0003DMT400021706
Ribosomal protein L41 (287 aa)
   
        0.445
PGSC0003DMT400078454
60S ribosomal protein L31 (120 aa)
   
        0.425
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (2%)