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PGSC0003DMT400027157 PGSC0003DMT400027157 PGSC0003DMT400081828 PGSC0003DMT400081828 PGSC0003DMT400055470 PGSC0003DMT400055470 PGSC0003DMT400065620 PGSC0003DMT400065620 PGSC0003DMT400055525 PGSC0003DMT400055525 PGSC0003DMT400061704 PGSC0003DMT400061704 PGSC0003DMT400007982 PGSC0003DMT400007982 PGSC0003DMT400020890 PGSC0003DMT400020890 PGSC0003DMT400045699 PGSC0003DMT400045699 PGSC0003DMT400042349 PGSC0003DMT400042349 PGSC0003DMT400043895 PGSC0003DMT400043895
"PGSC0003DMT400007982" - AML1 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400007982AML1 (851 aa)    
Predicted Functional Partners:
PGSC0003DMT400043895
RAPTOR1B (1347 aa)
     
 
  0.799
PGSC0003DMT400065620
RNA binding protein (237 aa)
     
   
  0.425
PGSC0003DMT400061704
RNA binding protein (737 aa)
     
   
  0.425
PGSC0003DMT400055470
RNA binding protein (545 aa)
     
   
  0.425
PGSC0003DMT400045699
APUM7 (Arabidopsis Pumilio 7); RNA binding / binding (646 aa)
     
   
  0.425
PGSC0003DMT400081828
Carboxy-lyase; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (205 aa)
           
  0.408
PGSC0003DMT400055525
Cytokinin riboside 5’-monophosphate phosphoribohydrolase LOG3; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (218 aa)
           
  0.408
PGSC0003DMT400042349
Cytokinin riboside 5’-monophosphate phosphoribohydrolase LOG7; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (218 aa)
           
  0.408
PGSC0003DMT400027157
Conserved gene of unknown function; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (220 aa)
           
  0.408
PGSC0003DMT400020890
Carboxy-lyase; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (228 aa)
           
  0.408
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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