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PGSC0003DMT400056710 PGSC0003DMT400056710 PGSC0003DMT400060831 PGSC0003DMT400060831 PGSC0003DMT400003951 PGSC0003DMT400003951 PGSC0003DMT400039341 PGSC0003DMT400039341 PGSC0003DMT400013148 PGSC0003DMT400013148 PGSC0003DMT400017488 PGSC0003DMT400017488 PGSC0003DMT400037768 PGSC0003DMT400037768 PGSC0003DMT400008085 PGSC0003DMT400008085 PGSC0003DMT400046948 PGSC0003DMT400046948 PGSC0003DMT400022054 PGSC0003DMT400022054 PGSC0003DMT400042238 PGSC0003DMT400042238
"PGSC0003DMT400008085" - Glutamyl-tRNA(Gln) amidotransferase subunit A in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400008085Glutamyl-tRNA(Gln) amidotransferase subunit A (608 aa)    
Predicted Functional Partners:
PGSC0003DMT400003951
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (551 aa)
 
  0.988
PGSC0003DMT400022054
Homomeric Acetyl-CoA Carboxylase (Hom-ACCase) (2267 aa)
   
  0.874
PGSC0003DMT400046948
Glutamyl-tRNA synthetase, cytoplasmic (740 aa)
   
  0.793
PGSC0003DMT400037768
Glutaminyl-tRNA synthetase (790 aa)
   
  0.783
PGSC0003DMT400013148
Aspartyl-tRNA synthetase (383 aa)
   
  0.777
PGSC0003DMT400060831
EMB2755 (580 aa)
   
  0.734
PGSC0003DMT400056710
Aspartyl-tRNA synthetase (607 aa)
   
  0.734
PGSC0003DMT400039341
Asparaginyl-tRNA synthetase, chloroplastic/mitochondrial (571 aa)
   
  0.734
PGSC0003DMT400042238
Acetyl co-enzyme A carboxylase biotin carboxylase subunit (536 aa)
   
  0.638
PGSC0003DMT400017488
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1487 aa)
   
   
  0.591
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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