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PGSC0003DMT400055629 PGSC0003DMT400055629 CHTB2 CHTB2 CHTB4 CHTB4 PGSC0003DMT400008271 PGSC0003DMT400008271 SK2 SK2 PGSC0003DMT400011693 PGSC0003DMT400011693 PGSC0003DMT400079931 PGSC0003DMT400079931 PGSC0003DMT400022685 PGSC0003DMT400022685 PGSC0003DMT400090746 PGSC0003DMT400090746 PGSC0003DMT400041850 PGSC0003DMT400041850 PGSC0003DMT400022684 PGSC0003DMT400022684
"PGSC0003DMT400008271" - Receptor-like kinase CHRK1 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400008271Receptor-like kinase CHRK1 (368 aa)    
Predicted Functional Partners:
PGSC0003DMT400079931
Beta-hexosaminidase 1 (575 aa)
   
 
  0.701
PGSC0003DMT400041850
Beta-hexosaminidase (531 aa)
   
 
  0.699
PGSC0003DMT400011693
Chitinase (327 aa)
 
   
  0.601
PGSC0003DMT400055629
Chitinase (323 aa)
 
   
  0.598
PGSC0003DMT400090746
Endochitinase (279 aa)
 
   
  0.590
PGSC0003DMT400022685
Endochitinase (280 aa)
 
   
  0.589
PGSC0003DMT400022684
Basic 30 kDa endochitinase (323 aa)
 
   
  0.589
CHTB2
Endochitinase 2; Defense against chitin-containing fungal pathogens (320 aa)
 
   
  0.587
SK2
Endochitinase (Chitinase) (264 aa)
 
   
  0.587
CHTB4
Endochitinase 4; Defense against chitin-containing fungal pathogens (332 aa)
 
   
  0.586
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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