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PGSC0003DMT400069241 PGSC0003DMT400069241 PGSC0003DMT400037606 PGSC0003DMT400037606 PGSC0003DMT400072222 PGSC0003DMT400072222 PGSC0003DMT400066792 PGSC0003DMT400066792 PGSC0003DMT400067125 PGSC0003DMT400067125 PGSC0003DMT400072860 PGSC0003DMT400072860 PGSC0003DMT400008281 PGSC0003DMT400008281 PGSC0003DMT400011584 PGSC0003DMT400011584 PGSC0003DMT400057423 PGSC0003DMT400057423 PGSC0003DMT400050219 PGSC0003DMT400050219 PGSC0003DMT400047329 PGSC0003DMT400047329
"PGSC0003DMT400008281" - NTGP1 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400008281NTGP1 (199 aa)    
Predicted Functional Partners:
PGSC0003DMT400067125
Golgi snare 11 protein; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (221 aa)
     
  0.997
PGSC0003DMT400066792
Golgi SNARE 12 protein; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (235 aa)
     
  0.997
PGSC0003DMT400047329
Syntaxin (335 aa)
     
  0.997
PGSC0003DMT400037606
Syntaxin (340 aa)
     
  0.997
PGSC0003DMT400011584
Syntaxin (352 aa)
     
  0.997
PGSC0003DMT400072860
Vesicle transport V-snare protein vti1a (221 aa)
     
  0.996
PGSC0003DMT400050219
Vesicle transport v-SNARE 11 (221 aa)
     
  0.996
PGSC0003DMT400072222
SNARE domain containing protein (231 aa)
     
  0.992
PGSC0003DMT400057423
Syntaxin-51 (233 aa)
     
  0.992
PGSC0003DMT400069241
Syntaxin (266 aa)
     
  0.991
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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