Full Link:
STRINGSTRING
PGSC0003DMT400058484 PGSC0003DMT400058484 PGSC0003DMT400018516 PGSC0003DMT400018516 PGSC0003DMT400053793 PGSC0003DMT400053793 PGSC0003DMT400082384 PGSC0003DMT400082384 PGSC0003DMT400000154 PGSC0003DMT400000154 PGSC0003DMT400072227 PGSC0003DMT400072227 PGSC0003DMT400075073 PGSC0003DMT400075073 PGSC0003DMT400008491 PGSC0003DMT400008491 PGSC0003DMT400039779 PGSC0003DMT400039779 PGSC0003DMT400048556 PGSC0003DMT400048556 PGSC0003DMT400048561 PGSC0003DMT400048561
"PGSC0003DMT400008491" - Histone mRNA exonuclease 1 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400008491Histone mRNA exonuclease 1 (403 aa)    
Predicted Functional Partners:
PGSC0003DMT400082384
Cop9 signalosome complex subunit (439 aa)
           
  0.444
PGSC0003DMT400072227
Cop9 signalosome complex subunit (439 aa)
           
  0.444
PGSC0003DMT400058484
Cop9 signalosome complex subunit (478 aa)
           
  0.444
PGSC0003DMT400053793
Sodium-dependent phosphate transport protein (511 aa)
           
  0.444
PGSC0003DMT400018516
Zinc finger protein (482 aa)
           
  0.444
PGSC0003DMT400000154
Sialin (606 aa)
           
  0.444
PGSC0003DMT400075073
Exonuclease (113 aa)
           
  0.400
PGSC0003DMT400048561
Exonuclease (158 aa)
           
  0.400
PGSC0003DMT400048556
Exonuclease (283 aa)
           
  0.400
PGSC0003DMT400039779
RNA exonuclease (266 aa)
           
  0.400
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (2%)