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PGSC0003DMT400069667 PGSC0003DMT400069667 PGSC0003DMT400080616 PGSC0003DMT400080616 PGSC0003DMT400053110 PGSC0003DMT400053110 PGSC0003DMT400083218 PGSC0003DMT400083218 PGSC0003DMT400008784 PGSC0003DMT400008784 PGSC0003DMT400046609 PGSC0003DMT400046609 PGSC0003DMT400058635 PGSC0003DMT400058635 PGSC0003DMT400022054 PGSC0003DMT400022054 Amy23 Amy23 AMYA1 AMYA1 PGSC0003DMT400045435 PGSC0003DMT400045435
"PGSC0003DMT400008784" - Neutral amino acid transport protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400008784Neutral amino acid transport protein (465 aa)    
Predicted Functional Partners:
PGSC0003DMT400083218
Aspartate kinase (922 aa)
     
 
  0.941
PGSC0003DMT400053110
Alpha amylase (441 aa)
     
  0.692
PGSC0003DMT400045435
Alpha-amylase (111 aa)
     
  0.692
AMYA1
Alpha-amylase (407 aa)
     
  0.692
Amy23
Alpha-amylase (423 aa)
     
  0.692
PGSC0003DMT400080616
Anthranilate phosphoribosyltransferase (384 aa)
       
 
  0.584
PGSC0003DMT400069667
Anthranilate phosphoribosyltransferase (401 aa)
       
 
  0.584
PGSC0003DMT400046609
Conserved gene of unknown function (268 aa)
       
 
  0.584
PGSC0003DMT400058635
Aspartokinase (582 aa)
     
 
  0.572
PGSC0003DMT400022054
Homomeric Acetyl-CoA Carboxylase (Hom-ACCase) (2267 aa)
   
   
  0.556
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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