Full Link:
STRINGSTRING
PGSC0003DMT400014945 PGSC0003DMT400014945 PGSC0003DMT400074548 PGSC0003DMT400074548 PGSC0003DMT400068136 PGSC0003DMT400068136 PGSC0003DMT400080629 PGSC0003DMT400080629 PGSC0003DMT400072522 PGSC0003DMT400072522 PGSC0003DMT400074197 PGSC0003DMT400074197 PGSC0003DMT400010366 PGSC0003DMT400010366 PGSC0003DMT400008800 PGSC0003DMT400008800 PGSC0003DMT400029147 PGSC0003DMT400029147 PGSC0003DMT400024361 PGSC0003DMT400024361 PGSC0003DMT400029146 PGSC0003DMT400029146
"PGSC0003DMT400008800" - Vacuolar ATPase subunit B in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400008800Vacuolar ATPase subunit B (524 aa)    
Predicted Functional Partners:
PGSC0003DMT400074548
ATP synthase subunit d (261 aa)
 
  0.996
PGSC0003DMT400014945
Vacuolar proton ATPase subunit E (241 aa)
   
  0.993
PGSC0003DMT400010366
Vacuolar ATP synthase subunit E (223 aa)
   
  0.993
PGSC0003DMT400080629
ATP synthase subunit d (113 aa)
   
  0.992
PGSC0003DMT400068136
Vacuolar H+-ATPase A2 subunit isoform (623 aa)
 
0.992
PGSC0003DMT400074197
Vacuolar H+-ATPase A1 subunit isoform (623 aa)
 
0.992
PGSC0003DMT400024361
Vacuolar ATP synthase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (130 aa)
   
  0.992
PGSC0003DMT400072522
Vacuolar ATP synthase subunit ac39 (351 aa)
   
  0.990
PGSC0003DMT400029147
Vacuolar ATP synthase subunit h (454 aa)
     
  0.988
PGSC0003DMT400029146
Vacuolar ATP synthase subunit h (86 aa)
     
  0.988
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (6%)