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PGSC0003DMT400072255 PGSC0003DMT400072255 PGSC0003DMT400072039 PGSC0003DMT400072039 PGSC0003DMT400079626 PGSC0003DMT400079626 PGSC0003DMT400037249 PGSC0003DMT400037249 PGSC0003DMT400018358 PGSC0003DMT400018358 PGSC0003DMT400001225 PGSC0003DMT400001225 PGSC0003DMT400008904 PGSC0003DMT400008904 PGSC0003DMT400038848 PGSC0003DMT400038848 PGSC0003DMT400025684 PGSC0003DMT400025684 PGSC0003DMT400033263 PGSC0003DMT400033263 PGSC0003DMT400029842 PGSC0003DMT400029842
"PGSC0003DMT400008904" - Transducin family protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400008904Transducin family protein (354 aa)    
Predicted Functional Partners:
PGSC0003DMT400018358
RNA binding protein (217 aa)
     
      0.905
PGSC0003DMT400001225
RNA binding protein (216 aa)
     
      0.905
PGSC0003DMT400079626
FK506-binding protein (485 aa)
     
      0.598
PGSC0003DMT400072255
FK506-binding protein (339 aa)
     
      0.598
PGSC0003DMT400072039
FK506 binding protein (250 aa)
     
      0.598
PGSC0003DMT400038848
Immunophilin (235 aa)
     
      0.598
PGSC0003DMT400037249
Fkbp-type peptidyl-prolyl cis-trans isomerase 2, chloroplast (228 aa)
     
      0.598
PGSC0003DMT400033263
Caldesmon (552 aa)
     
      0.598
PGSC0003DMT400029842
FKBP-type peptidyl-prolyl cis-trans isomerase (189 aa)
     
      0.598
PGSC0003DMT400025684
FK506 binding protein (219 aa)
     
      0.598
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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