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PGSC0003DMT400003328 PGSC0003DMT400003328 PGSC0003DMT400046584 PGSC0003DMT400046584 PGSC0003DMT400079931 PGSC0003DMT400079931 InvCD111 InvCD111 PGSC0003DMT400041850 PGSC0003DMT400041850 PGSC0003DMT400008907 PGSC0003DMT400008907 PGSC0003DMT400041356 PGSC0003DMT400041356 InvGF InvGF PGSC0003DMT400003327 PGSC0003DMT400003327 PGSC0003DMT400014762 PGSC0003DMT400014762 PGSC0003DMT400003329 PGSC0003DMT400003329
"PGSC0003DMT400008907" - Glycosyl hydrolase family in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400008907Glycosyl hydrolase family (444 aa)    
Predicted Functional Partners:
PGSC0003DMT400041850
Beta-hexosaminidase (531 aa)
   
 
  0.928
PGSC0003DMT400079931
Beta-hexosaminidase 1 (575 aa)
   
 
  0.924
InvCD111
Beta-fructofuranosidase (536 aa)
         
  0.915
InvGF
Invertase (512 aa)
         
  0.915
PGSC0003DMT400041356
Alpha-glucosidase (896 aa)
   
 
  0.905
PGSC0003DMT400046584
Aldose-1-epimerase; Converts alpha-aldose to the beta-anomer (355 aa)
     
 
    0.903
PGSC0003DMT400014762
Aldose-1-epimerase; Converts alpha-aldose to the beta-anomer (335 aa)
     
 
    0.903
PGSC0003DMT400003329
Non-cell-autonomous protein pathway2; Converts alpha-aldose to the beta-anomer (358 aa)
     
 
    0.903
PGSC0003DMT400003328
Aldose-1-epimerase; Converts alpha-aldose to the beta-anomer (355 aa)
     
 
    0.903
PGSC0003DMT400003327
Non-cell-autonomous protein pathway1; Converts alpha-aldose to the beta-anomer (360 aa)
     
 
    0.903
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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