Full Link:
STRINGSTRING
PGSC0003DMT400085883 PGSC0003DMT400085883 PGSC0003DMT400011163 PGSC0003DMT400011163 PGSC0003DMT400079491 PGSC0003DMT400079491 PGSC0003DMT400043897 PGSC0003DMT400043897 PGSC0003DMT400024403 PGSC0003DMT400024403 PGSC0003DMT400045166 PGSC0003DMT400045166 PGSC0003DMT400032709 PGSC0003DMT400032709 PGSC0003DMT400004879 PGSC0003DMT400004879 PGSC0003DMT400008944 PGSC0003DMT400008944 PGSC0003DMT400045694 PGSC0003DMT400045694 PGSC0003DMT400012508 PGSC0003DMT400012508
"PGSC0003DMT400008944" - RNA-binding region-containing protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400008944RNA-binding region-containing protein (264 aa)    
Predicted Functional Partners:
PGSC0003DMT400045694
Serine/arginine rich splicing factor (258 aa)
   
     
  0.508
PGSC0003DMT400045166
Ribonucleoprotein, chloroplast (284 aa)
   
          0.505
PGSC0003DMT400032709
Serine/arginine rich splicing factor (254 aa)
   
     
  0.472
PGSC0003DMT400085883
Zinc finger CCCH domain-containing protein 42 (145 aa)
   
          0.472
PGSC0003DMT400012508
Polyadenylate-binding protein (124 aa)
   
     
  0.460
PGSC0003DMT400079491
RNA-binding protein (197 aa)
   
          0.457
PGSC0003DMT400024403
RNA binding protein (107 aa)
   
     
  0.440
PGSC0003DMT400004879
Peptidyl-prolyl cis-trans isomerase E (209 aa)
   
     
  0.422
PGSC0003DMT400011163
Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase (185 aa)
   
          0.415
PGSC0003DMT400043897
Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase (193 aa)
   
          0.410
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (2%)