Full Link:
STRINGSTRING
AMYA1 AMYA1 Amy23 Amy23 PGSC0003DMT400057446 PGSC0003DMT400057446 PGSC0003DMT400077770 PGSC0003DMT400077770 DPEP DPEP PGSC0003DMT400008970 PGSC0003DMT400008970 PGSC0003DMT400053110 PGSC0003DMT400053110 glgP glgP PGSC0003DMT400025846 PGSC0003DMT400025846 PGSC0003DMT400045435 PGSC0003DMT400045435 PGSC0003DMT400025502 PGSC0003DMT400025502
"PGSC0003DMT400008970" - Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400008970Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic (203 aa)    
Predicted Functional Partners:
PGSC0003DMT400057446
Starch branching enzyme (258 aa)
   
  0.970
PGSC0003DMT400025846
1,4-alpha-glucan branching enzyme (914 aa)
   
  0.970
PGSC0003DMT400077770
Isoamylase isoform 1 (128 aa)
     
 
  0.914
glgP
Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (414 aa)
 
          0.887
PGSC0003DMT400053110
Alpha amylase (441 aa)
   
  0.765
PGSC0003DMT400045435
Alpha-amylase (111 aa)
   
  0.765
AMYA1
Alpha-amylase (407 aa)
   
  0.765
Amy23
Alpha-amylase (423 aa)
   
  0.765
DPEP
4-alpha-glucanotransferase; May act during starch breakdown to convert small oligosaccharides into larger molecules upon which starch phosphorylase can act, or may change the structure of starch molecules and grain architecture by modifying chain length, or may generate from starch and glucose oligosaccharides which can serve either as primers for new starch phosphoenzyme (596 aa)
   
 
  0.762
PGSC0003DMT400025502
Glucose-6-phosphate isomerase (271 aa)
   
   
  0.762
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (2%)