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PGSC0003DMT400024026 PGSC0003DMT400024026 PGSC0003DMT400084335 PGSC0003DMT400084335 PGSC0003DMT400081898 PGSC0003DMT400081898 PGSC0003DMT400083878 PGSC0003DMT400083878 PGSC0003DMT400009195 PGSC0003DMT400009195 PGSC0003DMT400010280 PGSC0003DMT400010280 PGSC0003DMT400056692 PGSC0003DMT400056692 PGSC0003DMT400079640 PGSC0003DMT400079640 PGSC0003DMT400080614 PGSC0003DMT400080614 PGSC0003DMT400074893 PGSC0003DMT400074893 PGSC0003DMT400074131 PGSC0003DMT400074131
"PGSC0003DMT400009195" - Cellular nucleic acid binding protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400009195Cellular nucleic acid binding protein (261 aa)    
Predicted Functional Partners:
PGSC0003DMT400056692
ATP-dependent RNA helicase (1141 aa)
     
  0.838
PGSC0003DMT400010280
RNA-binding protein (371 aa)
   
  0.755
PGSC0003DMT400074131
DEAD-box ATP-dependent RNA helicase 53 (498 aa)
   
  0.732
PGSC0003DMT400024026
DEAD-box RNA helicase (557 aa)
   
  0.731
PGSC0003DMT400084335
DEAD-box ATP-dependent RNA helicase 40 (65 aa)
     
  0.730
PGSC0003DMT400083878
Ethylene-responsive RNA helicase (501 aa)
     
  0.730
PGSC0003DMT400081898
DEAD/DEAH box helicase family protein (527 aa)
     
  0.730
PGSC0003DMT400080614
ATP-dependent RNA helicase DB10 (613 aa)
     
  0.730
PGSC0003DMT400079640
Dead box ATP-dependent RNA helicase (674 aa)
     
  0.730
PGSC0003DMT400074893
DEAD-box ATP-dependent RNA helicase 40 (65 aa)
     
  0.730
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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