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PGSC0003DMT400022442 PGSC0003DMT400022442 PGSC0003DMT400078163 PGSC0003DMT400078163 PGSC0003DMT400077357 PGSC0003DMT400077357 PGSC0003DMT400073713 PGSC0003DMT400073713 PGSC0003DMT400071337 PGSC0003DMT400071337 PGSC0003DMT400009450 PGSC0003DMT400009450 PGSC0003DMT400049441 PGSC0003DMT400049441 PGSC0003DMT400001180 PGSC0003DMT400001180 PGSC0003DMT400036856 PGSC0003DMT400036856 PGSC0003DMT400029104 PGSC0003DMT400029104 PGSC0003DMT400023039 PGSC0003DMT400023039
"PGSC0003DMT400009450" - DNA binding protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400009450DNA binding protein (93 aa)    
Predicted Functional Partners:
PGSC0003DMT400078163
Heat shock cognate 70 kDa protein 1 (648 aa)
     
  0.823
PGSC0003DMT400077357
Heat shock protein 70kD (573 aa)
     
  0.823
PGSC0003DMT400073713
Heat shock protein (639 aa)
     
  0.823
PGSC0003DMT400071337
Hsc70 (649 aa)
     
  0.823
PGSC0003DMT400049441
Heat shock cognate 70 kDa protein 2 (647 aa)
     
  0.823
PGSC0003DMT400036856
Heat shock protein (654 aa)
     
  0.823
PGSC0003DMT400029104
Heat shock protein hsp70 (614 aa)
     
  0.823
PGSC0003DMT400023039
Heat shock protein 70 (649 aa)
     
  0.823
PGSC0003DMT400022442
Heat shock protein hsp70 (486 aa)
     
  0.823
PGSC0003DMT400001180
Heat shock cognate 70 kDa protein (652 aa)
     
  0.823
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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