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PGSC0003DMT400028762 PGSC0003DMT400028762 PGSC0003DMT400089705 PGSC0003DMT400089705 PGSC0003DMT400009504 PGSC0003DMT400009504 PGSC0003DMT400078804 PGSC0003DMT400078804 PGSC0003DMT400088408 PGSC0003DMT400088408 PGSC0003DMT400029854 PGSC0003DMT400029854 PGSC0003DMT400059915 PGSC0003DMT400059915 PGSC0003DMT400074135 PGSC0003DMT400074135 PGSC0003DMT400019938 PGSC0003DMT400019938 PGSC0003DMT400053481 PGSC0003DMT400053481 PGSC0003DMT400049199 PGSC0003DMT400049199
"PGSC0003DMT400009504" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400009504Conserved gene of unknown function (216 aa)    
Predicted Functional Partners:
PGSC0003DMT400078804
Sporulation protein RMD5 (386 aa)
     
 
  0.958
PGSC0003DMT400029854
Erythroblast macrophage protein emp (501 aa)
     
 
  0.942
PGSC0003DMT400074135
WD-repeat protein (584 aa)
     
 
  0.939
PGSC0003DMT400019938
WD-repeat protein (466 aa)
     
 
  0.939
PGSC0003DMT400028762
FHY1 (215 aa)
       
 
  0.759
PGSC0003DMT400089705
NTGP4 (336 aa)
       
 
  0.679
PGSC0003DMT400088408
Fad NAD binding oxidoreductases (208 aa)
       
 
  0.679
PGSC0003DMT400059915
Protein yippee (89 aa)
       
 
  0.679
PGSC0003DMT400053481
Protein yippee (129 aa)
       
 
  0.679
PGSC0003DMT400049199
Yippee family protein (127 aa)
       
 
  0.679
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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