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PGSC0003DMT400081393 PGSC0003DMT400081393 PGSC0003DMT400011935 PGSC0003DMT400011935 PGSC0003DMT400068829 PGSC0003DMT400068829 PGSC0003DMT400001460 PGSC0003DMT400001460 PGSC0003DMT400068827 PGSC0003DMT400068827 PGSC0003DMT400009505 PGSC0003DMT400009505 PGSC0003DMT400071160 PGSC0003DMT400071160 PGSC0003DMT400036434 PGSC0003DMT400036434 PGSC0003DMT400017098 PGSC0003DMT400017098 PGSC0003DMT400051225 PGSC0003DMT400051225 PGSC0003DMT400071161 PGSC0003DMT400071161
"PGSC0003DMT400009505" - GTP-dependent nucleic acid-binding protein engD in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400009505GTP-dependent nucleic acid-binding protein engD (505 aa)    
Predicted Functional Partners:
PGSC0003DMT400051225
Ribosomal protein L36 (96 aa)
     
      0.871
PGSC0003DMT400081393
RelA-SpoT RSH1 (877 aa)
     
 
  0.862
PGSC0003DMT400036434
RSH (721 aa)
     
 
  0.862
PGSC0003DMT400017098
RelA-SpoT RSH1 (291 aa)
     
 
  0.862
PGSC0003DMT400011935
RelA-SpoT RSH4 (582 aa)
     
 
  0.862
PGSC0003DMT400001460
Guanosine-3’,5’-bis(Diphosphate) 3’-pyrophosphohydrolase (507 aa)
     
 
  0.862
PGSC0003DMT400068829
Delta 1-pyrroline-5-carboxylate synthetase (717 aa)
   
 
  0.857
PGSC0003DMT400068827
Delta 1-pyrroline-5-carboxylate synthetase (632 aa)
   
 
  0.857
PGSC0003DMT400071161
50S ribosomal protein L17, chloroplastic (203 aa)
     
 
  0.813
PGSC0003DMT400071160
50S ribosomal protein L17, chloroplastic (203 aa)
     
 
  0.813
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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