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PGSC0003DMT400071160 PGSC0003DMT400071160 PGSC0003DMT400047763 PGSC0003DMT400047763 PGSC0003DMT400037591 PGSC0003DMT400037591 PGSC0003DMT400033077 PGSC0003DMT400033077 PGSC0003DMT400050518 PGSC0003DMT400050518 PGSC0003DMT400071161 PGSC0003DMT400071161 PGSC0003DMT400029160 PGSC0003DMT400029160 PGSC0003DMT400029857 PGSC0003DMT400029857 PGSC0003DMT400017646 PGSC0003DMT400017646 PGSC0003DMT400037556 PGSC0003DMT400037556 PGSC0003DMT400009607 PGSC0003DMT400009607
"PGSC0003DMT400009607" - GTP-binding protein hflx in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400009607GTP-binding protein hflx (554 aa)    
Predicted Functional Partners:
PGSC0003DMT400029160
50S ribosomal protein L35, chloroplastic (151 aa)
     
 
  0.869
PGSC0003DMT400033077
50S ribosomal protein L33 (60 aa)
       
      0.725
PGSC0003DMT400029857
Gene of unknown function (60 aa)
       
      0.725
PGSC0003DMT400050518
50S ribosomal protein L27, chloroplastic (184 aa)
     
      0.679
PGSC0003DMT400071161
50S ribosomal protein L17, chloroplastic (203 aa)
     
 
  0.678
PGSC0003DMT400071160
50S ribosomal protein L17, chloroplastic (203 aa)
     
 
  0.678
PGSC0003DMT400017646
Ribosomal protein (341 aa)
     
 
  0.676
PGSC0003DMT400037556
Ribosomal protein L17 (160 aa)
       
 
  0.669
PGSC0003DMT400047763
Ribosomal protein L27 (146 aa)
     
      0.665
PGSC0003DMT400037591
Ribosomal protein L27 (188 aa)
     
      0.665
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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