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PGSC0003DMT400058910 PGSC0003DMT400058910 PGSC0003DMT400009801 PGSC0003DMT400009801 PGSC0003DMT400029670 PGSC0003DMT400029670 PGSC0003DMT400033081 PGSC0003DMT400033081 PGSC0003DMT400076269 PGSC0003DMT400076269 PGSC0003DMT400051883 PGSC0003DMT400051883 PGSC0003DMT400006953 PGSC0003DMT400006953 PGSC0003DMT400000482 PGSC0003DMT400000482 PGSC0003DMT400021589 PGSC0003DMT400021589 PGSC0003DMT400015149 PGSC0003DMT400015149 PGSC0003DMT400010183 PGSC0003DMT400010183
"PGSC0003DMT400009801" - Speckle-type POZ protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400009801Speckle-type POZ protein (93 aa)    
Predicted Functional Partners:
PGSC0003DMT400076269
Sm (88 aa)
     
  0.998
PGSC0003DMT400010183
Snrnp sm protein (97 aa)
     
  0.998
PGSC0003DMT400015149
LSM Sm family member (109 aa)
     
  0.998
PGSC0003DMT400021589
Small nuclear ribonucleoprotein f (91 aa)
     
  0.998
PGSC0003DMT400006953
Conserved gene of unknown function (99 aa)
     
  0.998
PGSC0003DMT400051883
Small nuclear ribonucleoprotein sm d1 (114 aa)
     
  0.992
PGSC0003DMT400029670
Small nuclear ribonucleoprotein (105 aa)
     
  0.992
PGSC0003DMT400000482
Small nuclear ribonucleoprotein-associated protein (271 aa)
     
  0.990
PGSC0003DMT400033081
U4/U6 small nuclear ribonucleoprotein Prp4 (583 aa)
     
  0.988
PGSC0003DMT400058910
Lsm1 (128 aa)
     
  0.988
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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