Full Link:
close STRING Website Improvement Campaign
deny allow Over the next 24 hours, we are collecting usage information on the web-interface (learn more).   Do you allow anonymous tracking of your activity ?
STRINGSTRING
PGSC0003DMT400092625 PGSC0003DMT400092625 PGSC0003DMT400022054 PGSC0003DMT400022054 PGSC0003DMT400037016 PGSC0003DMT400037016 GDCSP GDCSP PGSC0003DMT400083218 PGSC0003DMT400083218 PGSC0003DMT400061553 PGSC0003DMT400061553 PGSC0003DMT400010000 PGSC0003DMT400010000 PGSC0003DMT400078837 PGSC0003DMT400078837 PGSC0003DMT400070475 PGSC0003DMT400070475 PGSC0003DMT400025104 PGSC0003DMT400025104 PGSC0003DMT400048115 PGSC0003DMT400048115
"PGSC0003DMT400010000" - Acc synthase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400010000Acc synthase (550 aa)    
Predicted Functional Partners:
PGSC0003DMT400083218
Aspartate kinase (922 aa)
   
  0.937
PGSC0003DMT400025104
Ferredoxin-dependent glutamate synthase 1 (1621 aa)
   
  0.916
PGSC0003DMT400022054
Homomeric Acetyl-CoA Carboxylase (Hom-ACCase) (2267 aa)
   
 
  0.804
GDCSP
Glycine dehydrogenase [decarboxylating], mitochondrial; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (1035 aa)
       
  0.709
PGSC0003DMT400070475
Homoserine dehydrogenase (419 aa)
   
  0.697
PGSC0003DMT400048115
Homoserine dehydrogenase family protein (55 aa)
   
  0.697
PGSC0003DMT400037016
Dihydrodipicolinate reductase (298 aa)
       
  0.663
PGSC0003DMT400092625
Prephenate dehydrogenase (175 aa)
       
  0.663
PGSC0003DMT400078837
Arogenate dehydrogenase (377 aa)
       
  0.663
PGSC0003DMT400061553
Prephenate dehydrogenase (274 aa)
       
  0.663
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (3%)