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PGSC0003DMT400042261 PGSC0003DMT400042261 PGSC0003DMT400014822 PGSC0003DMT400014822 PGSC0003DMT400050379 PGSC0003DMT400050379 PGSC0003DMT400019204 PGSC0003DMT400019204 PGSC0003DMT400010086 PGSC0003DMT400010086 PGSC0003DMT400003234 PGSC0003DMT400003234 PGSC0003DMT400069485 PGSC0003DMT400069485 PGSC0003DMT400064277 PGSC0003DMT400064277 PGSC0003DMT400063056 PGSC0003DMT400063056 PGSC0003DMT400015585 PGSC0003DMT400015585 PGSC0003DMT400031868 PGSC0003DMT400031868
"PGSC0003DMT400010086" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400010086Conserved gene of unknown function (184 aa)    
Predicted Functional Partners:
PGSC0003DMT400014822
Conserved gene of unknown function (178 aa)
 
   
  0.693
PGSC0003DMT400031868
Electron carrier (201 aa)
   
        0.531
PGSC0003DMT400015585
Conserved gene of unknown function (260 aa)
   
        0.531
PGSC0003DMT400063056
Thylakoid lumenal 25.6 kDa protein, chloroplast (246 aa)
   
        0.523
PGSC0003DMT400064277
Conserved gene of unknown function (264 aa)
   
          0.516
PGSC0003DMT400050379
APE1 (285 aa)
   
        0.515
PGSC0003DMT400042261
Conserved gene of unknown function (434 aa)
   
          0.515
PGSC0003DMT400003234
Electron carrier (156 aa)
   
        0.512
PGSC0003DMT400019204
Calcium ion binding (296 aa)
   
        0.512
PGSC0003DMT400069485
Tetrapyrrole-binding protein, chloroplast (264 aa)
   
          0.510
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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