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PGSC0003DMT400060328 PGSC0003DMT400060328 PGSC0003DMT400056668 PGSC0003DMT400056668 PGSC0003DMT400075424 PGSC0003DMT400075424 PGSC0003DMT400069704 PGSC0003DMT400069704 PGSC0003DMT400010194 PGSC0003DMT400010194 PGSC0003DMT400062910 PGSC0003DMT400062910
"PGSC0003DMT400010194" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400010194Conserved gene of unknown function (348 aa)    
Predicted Functional Partners:
PGSC0003DMT400075424
Conserved gene of unknown function (1004 aa)
           
  0.515
PGSC0003DMT400056668
Transcription factor S-II domain-containing protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (121 aa)
           
  0.515
PGSC0003DMT400060328
DNA-directed RNA polymerase III; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (111 aa)
           
  0.485
PGSC0003DMT400069704
BAH domain-containing protein (1633 aa)
           
  0.406
PGSC0003DMT400062910
BAH domain-containing protein (1638 aa)
           
  0.406
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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