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PGSC0003DMT400044721 PGSC0003DMT400044721 PGSC0003DMT400020102 PGSC0003DMT400020102 PGSC0003DMT400010452 PGSC0003DMT400010452 PGSC0003DMT400070106 PGSC0003DMT400070106 PGSC0003DMT400060907 PGSC0003DMT400060907
"PGSC0003DMT400010452" - Transcription factor in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400010452Transcription factor (305 aa)    
Predicted Functional Partners:
PGSC0003DMT400044721
WRKY transcription factor (319 aa)
       
      0.580
PGSC0003DMT400020102
WRKY transcription factor (334 aa)
       
      0.580
PGSC0003DMT400070106
Thioredoxin reductase (231 aa)
       
      0.517
PGSC0003DMT400060907
Thioredoxin reductase (543 aa)
       
      0.517
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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