Full Link:
STRINGSTRING
PGSC0003DMT400010807 PGSC0003DMT400010807 PGSC0003DMT400079729 PGSC0003DMT400079729 PGSC0003DMT400072573 PGSC0003DMT400072573 PGSC0003DMT400065841 PGSC0003DMT400065841 PGSC0003DMT400062817 PGSC0003DMT400062817 PGSC0003DMT400083218 PGSC0003DMT400083218 ure ure PGSC0003DMT400050860 PGSC0003DMT400050860 PGSC0003DMT400001939 PGSC0003DMT400001939 PGSC0003DMT400025792 PGSC0003DMT400025792 PGSC0003DMT400058680 PGSC0003DMT400058680
"PGSC0003DMT400010807" - IAA-amino acid hydrolase ILR1-like 7 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400010807IAA-amino acid hydrolase ILR1-like 7 (246 aa)    
Predicted Functional Partners:
PGSC0003DMT400083218
Aspartate kinase (922 aa)
   
   
  0.594
ure
Urease (527 aa)
   
   
  0.450
PGSC0003DMT400072573
Dihydrodipicolinate synthase, chloroplastic (356 aa)
   
   
  0.410
PGSC0003DMT400050860
Dihydrodipicolinate synthase, chloroplastic (357 aa)
   
   
  0.410
PGSC0003DMT400079729
Ornithine decarboxylase (411 aa)
   
   
  0.408
PGSC0003DMT400065841
Pyridoxal-dependent decarboxylase, C-terminal sheet domain containing protein (235 aa)
   
   
  0.408
PGSC0003DMT400062817
Pyridoxal-dependent decarboxylase, C-terminal sheet domain containing protein (235 aa)
   
   
  0.408
PGSC0003DMT400025792
Ornithine decarboxylase (431 aa)
   
   
  0.408
PGSC0003DMT400001939
Diaminopimelate decarboxylase 1, chloroplastic (480 aa)
   
   
  0.408
PGSC0003DMT400058680
Aspartate-semialdehyde dehydrogenase (387 aa)
   
   
  0.402
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (6%)