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PGSC0003DMT400050860 PGSC0003DMT400050860 PGSC0003DMT400082431 PGSC0003DMT400082431 PGSC0003DMT400072573 PGSC0003DMT400072573 PGSC0003DMT400055176 PGSC0003DMT400055176 PGSC0003DMT400023399 PGSC0003DMT400023399 PGSC0003DMT400073985 PGSC0003DMT400073985 PGSC0003DMT400010835 PGSC0003DMT400010835 PGSC0003DMT400006891 PGSC0003DMT400006891 PGSC0003DMT400000836 PGSC0003DMT400000836 PGSC0003DMT400021616 PGSC0003DMT400021616 PGSC0003DMT400049770 PGSC0003DMT400049770
"PGSC0003DMT400010835" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400010835Conserved gene of unknown function (63 aa)    
Predicted Functional Partners:
PGSC0003DMT400073985
Methionyl-tRNA synthetase (812 aa)
   
 
  0.672
PGSC0003DMT400082431
Histidinol-phosphate aminotransferase, chloroplastic (414 aa)
       
 
  0.621
PGSC0003DMT400072573
Dihydrodipicolinate synthase, chloroplastic (356 aa)
       
      0.578
PGSC0003DMT400050860
Dihydrodipicolinate synthase, chloroplastic (357 aa)
       
      0.578
PGSC0003DMT400049770
Conserved gene of unknown function (349 aa)
       
      0.518
PGSC0003DMT400021616
ATELC (399 aa)
       
      0.518
PGSC0003DMT400006891
Protein ELC (406 aa)
       
      0.518
PGSC0003DMT400055176
N-acetyl-glutamate synthase (594 aa)
         
  0.510
PGSC0003DMT400023399
N-acetyl-glutamate synthase (603 aa)
         
  0.510
PGSC0003DMT400000836
Protein cbxX, chromosomal (483 aa)
   
        0.493
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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