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PGSC0003DMT400009595 PGSC0003DMT400009595 PGSC0003DMT400076613 PGSC0003DMT400076613 PGSC0003DMT400050335 PGSC0003DMT400050335 PGSC0003DMT400071114 PGSC0003DMT400071114 PGSC0003DMT400054941 PGSC0003DMT400054941 PGSC0003DMT400010926 PGSC0003DMT400010926 PGSC0003DMT400009516 PGSC0003DMT400009516 PGSC0003DMT400025837 PGSC0003DMT400025837 PGSC0003DMT400078229 PGSC0003DMT400078229 PGSC0003DMT400043628 PGSC0003DMT400043628 PGSC0003DMT400047980 PGSC0003DMT400047980
"PGSC0003DMT400010926" - Casein kinase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400010926Casein kinase (229 aa)    
Predicted Functional Partners:
PGSC0003DMT400071114
Bystin (448 aa)
       
  0.939
PGSC0003DMT400054941
Serine/threonine-protein kinase rio2 (459 aa)
     
  0.882
PGSC0003DMT400009595
DNA damage-binding protein 1 (261 aa)
     
      0.877
PGSC0003DMT400025837
Ribosome biogenesis protein tsr1 (790 aa)
     
  0.841
PGSC0003DMT400009516
Low temperature viability protein (634 aa)
       
  0.778
PGSC0003DMT400078229
Receptor protein kinase (1232 aa)
     
  0.711
PGSC0003DMT400047980
Serine/threonine-protein kinase ATR (141 aa)
     
 
  0.674
PGSC0003DMT400050335
Ribosomal protein (239 aa)
     
  0.665
PGSC0003DMT400043628
40S ribosomal protein S3 (102 aa)
     
  0.665
PGSC0003DMT400076613
RNA-binding protein nob1 (640 aa)
     
  0.665
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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