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PGSC0003DMT400074841 PGSC0003DMT400074841 PGSC0003DMT400008659 PGSC0003DMT400008659 PGSC0003DMT400090065 PGSC0003DMT400090065 PGSC0003DMT400039471 PGSC0003DMT400039471 PGSC0003DMT400072322 PGSC0003DMT400072322 PGSC0003DMT400010977 PGSC0003DMT400010977 PGSC0003DMT400046614 PGSC0003DMT400046614 PGSC0003DMT400023209 PGSC0003DMT400023209 PGSC0003DMT400003579 PGSC0003DMT400003579 PGSC0003DMT400039470 PGSC0003DMT400039470 PGSC0003DMT400039254 PGSC0003DMT400039254
"PGSC0003DMT400010977" - Ccaat-binding transcription factor subunit A in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
PGSC0003DMT400010977Ccaat-binding transcription factor subunit A (203 aa)    
Predicted Functional Partners:
PGSC0003DMT400090065
Ccaat-binding transcription factor (148 aa)
     
  0.934
PGSC0003DMT400074841
DNA binding protein (141 aa)
     
  0.934
PGSC0003DMT400039471
CONSTANS interacting protein 2a (154 aa)
     
  0.934
PGSC0003DMT400039470
CONSTANS interacting protein 2a (230 aa)
     
  0.934
PGSC0003DMT400039254
CONSTANS interacting protein 2a (253 aa)
     
  0.934
PGSC0003DMT400023209
CONSTANS interacting protein 2b (256 aa)
     
  0.934
PGSC0003DMT400008659
CONSTANS interacting protein 2b (252 aa)
     
  0.934
PGSC0003DMT400046614
Structure-specific recognition protein (639 aa)
     
  0.919
PGSC0003DMT400003579
Structure-specific recognition protein (639 aa)
     
  0.919
PGSC0003DMT400072322
YA1 (196 aa)
     
  0.913
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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