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PGSC0003DMT400023105 PGSC0003DMT400023105 PGSC0003DMT400097727 PGSC0003DMT400097727 PGSC0003DMT400061802 PGSC0003DMT400061802 PGSC0003DMT400085888 PGSC0003DMT400085888 PGSC0003DMT400074970 PGSC0003DMT400074970 PGSC0003DMT400011115 PGSC0003DMT400011115 PGSC0003DMT400063662 PGSC0003DMT400063662 PGSC0003DMT400022865 PGSC0003DMT400022865 PGSC0003DMT400029607 PGSC0003DMT400029607 PGSC0003DMT400038140 PGSC0003DMT400038140 PGSC0003DMT400023111 PGSC0003DMT400023111
"PGSC0003DMT400011115" - Speckle-type POZ protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400011115Speckle-type POZ protein (407 aa)    
Predicted Functional Partners:
PGSC0003DMT400097727
Cullin 1B (172 aa)
     
  0.698
PGSC0003DMT400085888
Plastid CUL1 (138 aa)
     
  0.698
PGSC0003DMT400074970
Cullin 1 (299 aa)
     
  0.698
PGSC0003DMT400063662
Plastid CUL1 (290 aa)
     
  0.698
PGSC0003DMT400061802
Cullin 1B (735 aa)
     
  0.698
PGSC0003DMT400038140
Cullin 1A (227 aa)
     
  0.698
PGSC0003DMT400029607
Cullin 1B (739 aa)
     
  0.698
PGSC0003DMT400023111
Cullin 1B (738 aa)
     
  0.698
PGSC0003DMT400023105
Cullin 1B (567 aa)
     
  0.698
PGSC0003DMT400022865
Cullin 1B (735 aa)
     
  0.698
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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